You should ask the question about desktop icons in another topic, but the most obvious cause IMO is that you're looking at the desktop for a different user account (*). If the VM got as far as that then clearly the disk was successfully cloned, as failure to do that right results in a VM that won't boot, not in a VM with a few missing graphics.
(*) Another possibility occurs that you imaged a newfangled OneDrive based desktop, and don't have OneDrive enabled on the VM. In general if it's a business PC then the IT people can locate the desktop contents on a server somewhere, giving you the same desktop on multiple devices. I didn't think of this right away because I instinctively avoid what I see as unnecessary complexity concerning my data.
I won't discuss these issues any further in this topic, since they have nothing to do with CloneVDI.